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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846310.1_cds_XP_016509594.1_22513
CDS Infomation

[gene=LOC107827050] [db_xref=GeneID:107827050] [protein=RING finger and transmembrane domain-containing protein 2-like] [protein_id=XP_016509594.1] [location=join(5168..5657,6844..6920,7052..7220,8192..8280,8368..8532,8709..8786,9818..9921,11324..11429)] [gbkey=CDS]
Sequence

ATGGATACTTTGGATGGTTCAGAAAATGCAAATATTTCTCCCACATCTCCAAATTCGACG
ACTTTTGGAGTTCAATTCAGTCCGCTGCGCTTCTTCCAATCCCCAGTTTCCACTTTGCTT
GAGTATTCCGGACTCCTTCGGGTCCGACCCGATAACCCAGAAACGGAGCCTCTTGTAGCT
GATAATAATACCAATGTTAGTGGAGATATTAATAGTAGCAGTAGTGGGGAGGTTTCAATT
AGAATAACTGAGGGTGAGGATAGTGGGGAGGGAGAGGGCGGTGGTTCTGTTGAGGAGAGG
GAGGGTTCTGGTGTGGACGCGTCCACGGTGCCTACTGTTAGTGCTGAGGATGATGATGAT
GATGCTGGGAGTAATAATAGGGATTCGACGTACCAAAGATTTGATATACAGCAAGTGGCA
AGGTGGATTGAGCAGATTCTTCCATTTTCCTTGCTTCTCTTGTTTGTTTTCATCCGCCAG
CATTTGCAAGGTTTCTTTGTCACAATTTGGATCACTGCCTTCATGTTCAAGTCAAATGAC
ATTCTTCGGAAGCAGACAGCATTAAAGGGAGAGAGAAAGATAGATGTCCTTGTTGGTTAT
TTTGTGGTTTTCGTGATTCATGTTATTGGAATCTACTGGTGGTATCGTAATGATGACCTT
TTCTATCCATTGCTTATGGTTCCTCCGAAGGTCATCCCACCTTTCTGGCATGCTATATTC
ATGATCCTGGTAAATGATACGATGGTGCGTCAGGCAGCAATGGCTTTGAAGTTGGTGCTG
CTTATGTATTACAAGAATGGCAGGGGCCACAATTTTCGTAGACAGGGTCAAATGCTGACT
CTGGTGGAGTACACACTGTTGTTATATCGTGGACTGTTACCTGCTCCTGTTTGGTATAGA
TTCTTTCTCAATAAGGATTACGGCAGCCTTTTTTCATCACTGACAACGGGGTTGTACTTG
ACGTTTAAGCTTACCTCAATTGTTGAGAAGGTAAAATCATTCTATACTGCTTTGAAGGCA
TTGTCCAAAAAGGAAGTCCATTATGGGTCTCATGCCACACCTGAGCAGGTAAATGCGGCT
GGTGATCTGTGCGCTATTTGCCAGGAGAAGATGCATGCACCAATTTTGTTGCGTTGCAAA
CACATCTTCTGTGAAGACTGTGTCTCAGAGTGGTTTGAAAGAGAAAGAACTTGCCCTCTG
TGCAGAGCATTGGTCAGACCGGCTGATCTAAGATCTTTTGGTGATGGATCCACTAGCCTT
TTCTTCCAGTTATTTTAG

Peptide Sequence

PEP ID

XP_016509594.1
PEP Infomation

PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Nicotiana tabacum]
Sequence

MDTLDGSENANISPTSPNSTTFGVQFSPLRFFQSPVSTLLEYSGLLRVRPDNPETEPLVA
DNNTNVSGDINSSSSGEVSIRITEGEDSGEGEGGGSVEEREGSGVDASTVPTVSAEDDDD
DAGSNNRDSTYQRFDIQQVARWIEQILPFSLLLLFVFIRQHLQGFFVTIWITAFMFKSND
ILRKQTALKGERKIDVLVGYFVVFVIHVIGIYWWYRNDDLFYPLLMVPPKVIPPFWHAIF
MILVNDTMVRQAAMALKLVLLMYYKNGRGHNFRRQGQMLTLVEYTLLLYRGLLPAPVWYR
FFLNKDYGSLFSSLTTGLYLTFKLTSIVEKVKSFYTALKALSKKEVHYGSHATPEQVNAA
GDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVRPADLRSFGDGSTSL
FFQLF

Transcript Sequence

Gene sequence data has not been registered.